The Department of Personnel is responsible for team building of cadres and talented personnel, and the management of institution staffing, post setting, personnel recruitment, professional title evaluation, remuneration and benefit, and labour relation. It also develops and manages the information system of human resources.

The Department of Finance and Assets is responsible for the management of budget and final account, accounting tasks, revenue and expenditure, and finance. It also participates in decision making of significant economic policy and undertakes asset management.  

The Department of Medical Affairs is responsible for resource distribution, organizing medical service, ensuring quality and safety, reporting medical service statistics, addressing important public health events, as well as cardiovascular diseases management.

The Department of Research and Industry is responsible for research base and platform building, bio-safety management of laboratory, research project management, and transformation of research results. It also undertakes the research, development, evaluation, and application of cardiac-related new drugs, new devices, new reagents, and new techniques.  

The Department of Medical Education is responsible for the enrolment and training of graduate students, residents, and advanced study students, formulating education plans and regulations, and providing different educational training. It also undertakes health education in cardiovascular diseases.  

The Department of Development is responsible for broadening development space and expanding the brand influence. It implements government policies on medical reform, enhances performance evaluation, boosts motivation, and fully represents the public welfare nature of development.  

The Department of Discipline Inspection, Supervision and Audit is responsible for discipline inspection and supervision, building good conduct and political integrity, and auditing work.

The Department of Preventive Medicine is responsible for conducting clinical research, epidemiological survey, as well as community-based prevention and control research on cardiovascular diseases. It also undertakes the design, quality control, organization, and implementation of projects in cardiovascular disease prevention and control.

The Department of Policy and Legal Research is responsible for conducting health policy and health economics research, and providing policy recommendation for governmental decision making on related policies, laws and regulations. It also undertakes the coordination and management of legal affairs.

The Department of Information Management, Monitoring and Evaluation is responsible for planning, implementing and managing the construction of the Center’s informatization, as well as the maintenance of the Center’s official website.

The Department of Resource Materials is responsible for establishing the system of purchasing, supply and support for resource materials, such as medicine, equipment and consumables.  It also undertakes the repairs and management of instruments and fixed assets.

The Department of International Cooperation is responsible for engaging in international communication and cooperation in cardiovascular disease prevention and control as well as the related fields.

The Department of Logistics and Security is responsible for the operation and maintenance of power equipment, property service, estate management, management of official cars, reconstruction engineering and decoration, environment construction, and logistic services such as dietary service. It also performs the duties in fire protection, security and traffic safety.